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Consider JGI Dremio lakehouse for GOLD sample data

Status: Open.

#160 In microbiomedata/sample-annotator;

· turbomam opened on Jan 27, 2026

test warnings

Status: Open.

#150 In microbiomedata/sample-annotator;

· turbomam opened on Apr 21, 2025

find a place to save extract-study-ids-with-biosamples stats

Status: Open.

#148 In microbiomedata/sample-annotator;

· turbomam opened on Apr 19, 2025

get NLCD values for air study

Status: Open.

#144 In microbiomedata/sample-annotator;

· turbomam opened on Jan 14, 2025

create report of GOLD ecosystems and mixs environmental triads

Status: Open.

#142 In microbiomedata/sample-annotator;

· turbomam opened on Jan 14, 2025

GOLD to MongoDB code essentially has two levels of caching: cachedir/ and MongoDB itself

Status: Open.

#138 In microbiomedata/sample-annotator;

· turbomam opened on Jan 14, 2025

GOLD to MongoDB code doesn't pull in Organisms or Sequencing Projects from Studies that don't have Biosamples

Status: Open.

#135 In microbiomedata/sample-annotator;

· turbomam opened on Jan 14, 2025

GOLD study ingest improvement- convert contacts to has credit associations

Status: Open.

#123 In microbiomedata/sample-annotator;

· aclum opened on Mar 29, 2023

SSSOM mapping file between GOLD fields and NMDC slots

Status: Open.

#114 In microbiomedata/sample-annotator;

· sujaypatil96 opened on Jan 10, 2023

Web form that accepts dataset

Status: Open.

#101 In microbiomedata/sample-annotator;

· sujaypatil96 opened on Jul 7, 2022

Inconsistency between data in GOLD and data from bioregistry

bugSomething isn't workingSomething isn't working

Status: Open.

#93 In microbiomedata/sample-annotator;

· sujaypatil96 opened on Jun 7, 2022

issue-79-Generalizable-Cleaning-Scripts

Status: Open.

#79 In microbiomedata/sample-annotator;

· aarleed opened on Apr 30, 2022