Switch from black to ruff for code formatting

.github/bump_version.py

@@ -19,9 +19,7 @@ def get_current_version(pyproject_path: Path) -> str:
 
 def infer_bump(changelog_dir: Path) -> str:
     fragments = [
-        f
-        for f in changelog_dir.iterdir()
-        if f.is_file() and f.name != ".gitkeep"
+        f for f in changelog_dir.iterdir() if f.is_file() and f.name != ".gitkeep"
     ]
     if not fragments:
         print("No changelog fragments found", file=sys.stderr)

.github/workflows/pr_code_changes.yaml

@@ -16,7 +16,7 @@ jobs:
         uses: astral-sh/setup-uv@v5
       - name: Install relevant dependencies
         run: |
-          uv pip install black isort linecheck --system
+          uv pip install "ruff>=0.9.0" --system
       - name: Check code formatting
         run: make check-format
 

Makefile

@@ -5,14 +5,10 @@ test:
 	pytest tests/ --cov=microimpute --cov-report=xml --maxfail=0
 
 check-format:
-	linecheck .
-	isort --check-only --profile black microimpute/
-	black . -l 79 --check
+	ruff format --check .
 
 format:
-	linecheck . --fix
-	isort --profile black microimpute/
-	black . -l 79
+	ruff format .
 
 documentation:
 	cd docs && jupyter book clean . --all

changelog.d/ruff-format.changed

@@ -0,0 +1 @@
+Switch from black to ruff for code formatting