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1. BioX-CPath BioX-CPath Public

   A biologically interpretable graph neural network for multistain computational pathology - CVPR 2025

   Python 26 1

2. aaronwtr/PertEval aaronwtr/PertEval Public

   Evaluation suite for transcriptomic perturbation effect prediction models. Includes support for single-cell foundation models.

   Python 35 8

3. ImmunoHistoBench ImmunoHistoBench Public

   A benchmark of histopathology Foundation Models on multi-stain Immunohistochemistry immune datasets AIM-FM workshop @ NeurIPS 24

   Python 10

4. MUSTANG MUSTANG Public

   Multi-stain graph self attention multiple instance learning for histopathology Whole Slide Images - BMVC 2023

   Python 14 1

5. WSI_Multiple_Instance_Learning WSI_Multiple_Instance_Learning Public

   A repo for Multiple Instance Learning applied to Whole Slide Images

   Python 5 2

6. WSI_Segmentation WSI_Segmentation Public

   Automated segmentation of H&E and Immunohistochemistry stained synovial tissue in histopathology Whole Slide Images - MIUA 2023

   Python 6